Thursday, September 3, 2020

 

What We Know (And Don’t) About COVID 19

By Ken Karch, MPH

Updated September 1, 2020 Ver.9.0

(Updated material (since 7/15/2020) highlighted)

 

1.     Members of the general public may be infected by droplet spread from other individuals; there is little evidence that infection can come from animals such as pets, except through intermediate contact with other persons who are infected (an announcement several months ago of an apparent COVID-19 case in a tiger at a Bronx (NY) zoo and two house cats in New York are being investigated). There is evidence that the COVID-19 virus is a zoonosis (animal to human spread), and that the initial breakout occurred from a bat population to humans thru a wild meat market or virology lab in China.  From there it apparently found its way to other countries by person-to-person contact. There is some evidence that the virus reached the US and spread prior to the generally accepted date in early March, 2020.

2.    Droplets are those which we are told have an effective distance of no more than 6 feet; therefore, individuals are asked to maintain a social distance of 6 feet. Recent studies have suggested that the virus does not easily spread to people from surfaces.

3.    We do not know whether fine, dry particles containing the virus can survive, and become infective beyond a 6 foot distance. My MPH training indicated that the effective distance of sneeze particles is 15 feet.  Others have suggested that it may be up to 27 feet, or that the virus may be pervasive and infective throughout the general atmosphere near a carrier…this is usually called aerosolized.  There is some evidence that smaller virus particles can be transmitted through normal talking or breathing, and in particular in situations where lung air exchange is unusually high, such as exercising and agitation. Smaller particles (less than 1 micron) are most effective in entering the lungs.  The virus particles attach to lung membranes and create a reaction which damages the ability of the lungs to function properly, causing difficulty in breathing, inability to transfer oxygen, damage to other organs, and sometimes death.  The definitions of direct transmission, indirect transmission, droplet spread, and aerosolization are understood and used differently by different people, particularly the media.  Recent studies have indicated that the COVID-19 virus is particularly susceptible to sunlight, moisture, and temperature. Droplet spread diseases include the common cold, flu, meningococcal disease, and rubella, while aerosol diseases include chickenpox, measles, and tuberculosis.

4.    We are told that face masks are effective, somewhat effective, or not effective by different experts, that such protection varies with the materials from which the mask is made, and the fit, and that the protection may be different between outgoing vs. incoming infective agents.  General guidance from the CDC currently suggests that most face masks may be somewhat effective in preventing or reducing infectious agents from passing from the wearer to others, rather than from others to the wearer.  Therefore, it requires a social commitment of the potential wearer to protect others.  It is not clear whether all, many, some, or no potential wearers understand this, or accept such a social contract.  We have been warned of the risk that mask wearers may be lulled into a false sense of security by wearing a mask, and ignore other social distance recommendations.  Beyond that, pop-up makers of cloth masks tell you that cloth is the only reliable media for masks, and they try to sell them as a protection for the wearer. Standards exist to measure the effectiveness of face masks, with cloth masks about 50% effective in reducing virus particles, provided they are properly worn and maintained.  Filtration studies reveal that viruses are so small as to require adsorption as the filtration mechanism, with moisture increasing the value of the filter until it breaks down, collects live viruses (thereby creating an additional source of infection), or plugs, which forces aerosols to escape around the mask.  A recent study at Office Depot in Tacoma indicated that about 15 to 35% of checkout customers were wearing face coverings of many sorts; recent increases in availability and two recent orders by the Governor mandating masks in retail establishments have raised that to more than 99% by September 1, 2020.

5.    Although COVID-19 appears to infect all ages, we know that elderly persons, and others with compromised immune systems, and other underlying health conditions (which is poorly defined and quite broad) have a greater risk of death, once they are infected.  Typical case fatality rates (CFR) are at or about 15% in those populations, and less than 5% in other populations. The CFR from March 6 to March 10 in Washington State from the Kirkland care facility was above 15%; since then it dropped to around 4% before rising slowly to 5.5% by early May, then dropping slowly to about 2.6% on September 1.  Deaths are a lagging indicator to identified cases, so persons infected during the early March timeframe were not dying until mid- to late-March. The same pattern emerged in Pierce County, where the current CFR is about 2.2%, since rising to about 4% in mid-May from below 2% since early March.  Pierce County did not experience an initial “bump,” and may have escaped the rapidly rising case and death numbers experienced from Kirkland (which dominated the King County, State of Washington, and even the US reported data for the first 10 days of March), since social distancing and other measures were widely recommended before those who would have been infected in early March would already have exhibited corresponding death rates in late March. Beyond this, the reporting of morbidity and case fatality rates is likely skewed due to decisions to address risks to health care workers and those with symptoms or immune system issues (the most likely to have the disease) first.  As a result, future morbidity and mortality rates may in fact drop further. 

6.    Efforts are underway to increase the percentage of persons tested above the current (September 1, 2020) levels of 23% and 18% (formerly 12.6% and 8.8% on July 15; and 5.1% and 4.4% on May 29) of the total population for the US and the State of Washington, respectively.  Pierce County had a 4.0% tested rate on June 23, but ceased reporting this data on that date. Of those tested, 7.7% and 5.1% (formerly 8.2% and 5.9% on July 15; and 10.4% and 6.1% testing positive on May 29) of those tested positive in the US and the State of Washington, respectively.  Note that the data for positive tests for the US as a whole differ between what the CDC reports (over 10%) and the Johns Hopkins database, from which other national and state figures in this report are extracted. Again, Pierce County had a 6.6% positive test rate on June 23, but ceased reporting this data on that date. Any of these rates are well below the 50-60% thought by many to be needed to confer herd immunity.

7.    A major jump in new cases began in both the US and Washington State during the first week of June, continued a steep increase to July 15, before  following a gradual decline since July 15 through September 1. The July 15 7-day average new case data (about 67,000) was much higher than the previous peak of about 31,000 for the US but has since dropped to about 42,000 on September 1; and for Washington State was also substantially higher (about 970 on July 15 vs. 180 in late May), but has since dropped to about 460 on September 1. 

8.    Case fatality rates (number of deaths divided by number of cases) rose to a peak during the 2nd and 3rd week of May in the US; the 4th week of April in Washington State, and the 4th week of May through the 2nd week of June in Pierce County, before dropping to about 3.1, 2.6, and 2.2 in the US, Washington, and Pierce County, respectively, on September 1. The trend is downward, as one might expect as the number of tests in the general population increases relative to the skewed sample early testing of specially susceptible individuals and associated healthcare workers.    

9.    COVID-19 reported death rates fall disproportionately among older persons and persons with other diseases or immune system disorders.  The “outbreaks” resulting in COVID-19 deaths in this population are considered “premature deaths;” and reduce the number of deaths of some fraction of the same persons from other causes during the same or later time frames. To put it bluntly, if I die today of something, I can’t die tomorrow of something else. Of the Pierce County deaths reported as of July 15, 89% were over age 60, a cohort which constitutes only 21% of the population. There are recent challenges to the reported COVID-19 death rates, as only a fraction appear to be exclusively, or primarily, COVID-19 deaths with influenza, pneumonia, and other respiratory and non-respiratory diseases making large contributing co-mortality.

10. We are told that the usual “incubation period” of COVID-19 probably does not exceed 14 days (though some say it is longer), but that a period of infectivity may begin before symptoms are apparent to the infected individual or others, with infectivity being greatest in the middle of the period (presumably something akin to a “bell-shaped curve”); and with greatest infectivity in, say, the 6th to 10th day. We do not know how long the period of infectivity lasts for those with and without symptoms.

11.  The media has been full of reports, both positive and negative, about the effectiveness and safety of various treatment modalities, including those associated with hydroxychloroquine, azithromycin, zinc, dexamethasone, and remdesivir.

12. We do not know whether persons who have contracted the virus (and tested positive) and recovered, have acquired immunity for future attacks of the same, or similar, viruses, or whether such immunity may be short-term or longer term.  Until we acquire case and death data from a greater, and more representative, proportion of the general population, we will be only guessing about herd immunity. Beyond that, a debate exists between those who believe the proper approach is to quarantine those who have been diagnosed with COVID19 or are especially susceptible to it (a fraction of the population in the few percentages of the total), and therefore allow herd immunity to develop among the rest, a large fraction of whom will exhibit little or no symptoms in the process (the examples of tour boat and military ship outbreaks are instructive here).  The arguers for this position say the current efforts to quarantine virtually the entire population, with ensuing economic, social, religious, and political impacts, will virtually assure that a second and third harmonic of cases and deaths will occur, once restrictions are lifted. There is mounting evidence that the new normalized case and death rates in the US approach those of countries, such as Sweden, which did not enact sweeping shut down requirements, and which greatly exceed those of others who did (eg., Norway, Denmark, Finland).  There is also mounting evidence of “bumps” in new cases in those states which opened prematurely (i.e., before meeting Federal guidelines). Major increases in cases occurred leading up to July 15 in Florida, Texas, California, Arizona, and Georgia, but all but California have seen a relatively steep downward trend to September 1.

13. The role of government in requiring vaccination may prove crucial in the future, once an effective, safe, vaccination protocol is found. A case in point is the difference between the mandatory vaccination laws governing childhood diseases (with some religious and other exceptions, recently changed in Washington State law), versus the voluntary flu vaccination recommendations. Lab results reported in the past few weeks suggest that a vaccine protocol proof of concept in lab animals has been achieved, and several vaccines have moved to the animal testing phase.

14. We do not know whether, or the extent to which, the virus may mutate to other more (or less) dangerous forms. There is some evidence that such mutations are not uncommon.

15. We know that COVID19 virus community episodes seem to behave as other viruses and communicable diseases do, namely a logarithmic growth phase, a leveling off period, and a decline.  The slopes of the lines give the best evidence of the place a community is in on the curve; the area under the curve represents the total extent of the pandemic (classical differential and integral calculus is in play here).  This is why we are urged to take necessary steps to “flatten the curve” (thereby spreading it out in time to give more time to deal with shortages and take other preventive and treatment steps). Flattening the curve implies we are at the top of the number of cases (or deaths), and the public needs to understand that a number of new cases (or deaths) perhaps nearly equivalent to the numbers already experienced will be occur as the curve returns to near zero. Beyond that, every new “bump,” such as that experienced in the past few weeks, will increase the number occurring on the way back to “normal.”

16. The primary means of prevention, in the absence of vaccination, is social distancing for communicable diseases.  Daniel Defoe, in The Journal of the Plague Year, in 1722, described the effectiveness of social distancing by recounting the different results around London in 1665 between those who escaped the city to country places, versus those who were forced (literally) to remain in crowded dwellings with their families, often resulting in the death of the entire family.  

17. The future of the pandemic is largely unknown.  It is complicated by the fact that we have tested only about 18-23% of the population; those tested are skewed toward health care workers and high susceptibility persons; of those tested about 4 to 15% test positive; of those testing positive, death rates range from 2 to 20%; we don’t know how many asymptomatics are out there; we don’t know whether, when, and the degree to which asymptomatics are shedding virus, or how long they will continue to do so; nor the effectiveness of preventive measures such as social distancing and masks; treatment modalities; or the potential effectiveness of vaccines. It is further complicated by the fact that virtually all data comes in from 50 or more different (e.g., state and local) agencies, each of which has its own set of priorities, capabilities, and epidemic management plans (did someone say something about herding cats?).  We don’t know the recovery rate of symptomatics or asymptomatics. We don’t know whether asymptomatics secure immunity from future attacks.    “Flattening the curve” of deaths will follow “flattening the curve” of positive cases by some number of days, and once the curves are flat, new cases and deaths will continue to follow while the numbers return to near zero, and may very well equal or exceed cases and deaths up to the “plateau” or “apex.”  Furthermore, relaxation of the prevention tools may result in a second and third outbreak, as occurred in the 1918 flu epidemic and others.

18.  As of July 15, between 4 and 5% of Pierce County residents had been tested, with a positive COVID-19 infection rate hovering between 6 and 7% of those tested, and the case fatality rate between 3 and 4% of those testing positive. Total number of deaths (90) as a proportion of Pierce County’s total population (about 880,000) is 0.1 per 1000 residents. 

 

Monday, May 11, 2020

What We Know (And Don't) About COVID19



What We Know (And Don’t) About COVID 19
By Ken Karch, MPH
Updated May 9, 2020 Ver.5.0
(Updated material (since 4/25/2020) highlighted)

1.     Members of the general public may be infected by droplet spread from other individuals; there is little evidence that infection can come from animals such as pets, except through intermediate contact with other persons who are infected (an announcement a couple of weeks ago of an apparent COVID-19 case in a tiger at a Bronx (NY) zoo and two house cats in New York are being investigated). There is evidence that the COVID-19 virus is a zoonosis (animal to human spread), and that the initial breakout occurred from a bat population to humans thru a wild meat market or virology lab in China.  From there it apparently found its way to other countries by person-to-person contact.
2.    Droplets are those which we are told have an effective distance of no more than 6 feet; therefore, individuals are asked to maintain a social distance of 6 feet
3.    We do not know whether fine, dry particles containing the virus can survive, and become infective beyond a 6 foot distance. My MPH training indicated that the effective distance of sneeze particles is 15 feet.  Others have suggested that it may be up to 27 feet, or that the virus may be pervasive and infective throughout the general atmosphere near a carrier…this is usually called aerosolized.  There is some evidence that smaller virus particles can be transmitted through normal talking or breathing. Smaller particles (less than 1 micron) are most effective in entering the lungs.  The virus particles attach to lung membranes and create a reaction which damages the ability of the lungs to function properly, causing difficulty in breathing, inability to transfer oxygen, damage to other organs, and sometimes death.  The definitions of direct transmission, indirect transmission, droplet spread, and aerosolization are understood and used differently by different people, particularly the media.  Recent studies have indicated that the COVID-19 virus is particularly susceptible to sunlight, moisture, and temperature. Droplet spread diseases include the common cold, flu, meningococcal disease, and rubella, while aerosol diseases include chickenpox, measles, and tuberculosis.
4.    We are told that face masks are effective, somewhat effective, or not effective by different experts, that such protection varies with the materials from which the mask is made, and the fit, and that the protection may be different between outgoing vs. incoming infective agents.  General guidance currently suggests that most face masks may be somewhat effective in preventing or reducing infectious agents from passing from the wearer to others, rather than from others to the wearer.  Therefore, it requires a social commitment of the potential wearer to protect others.  It is not clear whether all, many, some, or no potential wearers understand this, or accept such a social contract.  We have been warned of the risk that mask wearers may be lulled into a false sense of security by wearing a mask, and ignore other social distance recommendations.  Beyond that, pop-up makers of cloth masks tell you that cloth is the only reliable media for masks, and they try to sell them as a protection for the wearer. Standards exist to measure the effectivenss of face masks, with cloth masks about 50% effective in reducing virus particles, provided they are properly worn and maintained. 
5.    Although COVID-19 appears to infect all ages, we know that elderly persons, and others with compromised immune systems, and other underlying health conditions (which is poorly defined and quite broad) have a greater risk of death, once they are infected.  Typical case fatality rates (CFR) are at or about 15% in those populations, and less than 5% in other populations. The CFR from March 6 to March 10 in Washington State from the Kirkland care facility was about 15%; since then it dropped to around 4% before rising slowly to 5 to 6%.  Deaths are a lagging indicator to identified cases, so persons infected during the early March timeframe were not dying until mid- to late March. The same pattern emerged in Pierce County, where the current CFR is between 3 and 4%, and had been below 2% since early March.  Pierce County did not experience an initial “bump,” and may have escaped the rapidly rising case and death numbers experienced from Kirkland (which dominated the King County, State of Washington, and even the US reported data for the first 10 days of March), since social distancing and other measures were widely recommended before those who would have been infected in early March would already have exhibited corresponding death rates in late March. Beyond this, the reporting of morbidity and case fatality rates is likely skewed due to decisions to address risks to health care workers and those with symptoms or immune system issues (the most likely to have the disease) first.  As a result, future morbidity and mortality rates may in fact drop further. 
6.    COVID-19 reported death rates fall disproportionately among older persons and persons with other diseases or immune system disorders.  The “outbreaks” resulting in COVID-19 deaths in this population are considered “premature deaths;” and reduce the number of deaths of some fraction of the same persons from other causes during the same or later time frames. To put it bluntly, if I die today of something, I can’t die tomorrow of something else.
7.    We are told that the usual “incubation period” of COVID-19 probably does not exceed 14 days (though some say it is longer), but that a period of infectivity may begin before symptoms are apparent to the infected individual or others, with infectivity being greatest in the middle of the period (presumably something akin to a “bell-shaped curve”); and with greatest infectivity in, say, the 6th to 10th day.
8.    We do not know whether persons who have contracted the virus (and tested positive) and recovered, have acquired immunity for future attacks of the same, or similar, viruses, or whether such immunity may be short-term or longer term.  Until we acquire case and death data from a greater proportion of the general population, we will be only guessing about herd immunity. Beyond that, a debate exists between those who believe the proper approach is to quarantine those who have been diagnosed with COVID19 or are especially susceptible to it (a fraction of the population in the few percentages of the total), and therefore allow herd immunity to develop among the rest, a large fraction of whom will exhibit little or no symptoms in the process (the examples of tour boat and military ship outbreaks are instructive here).  The arguers for this position say the current efforts to quarantine virtually the entire population, with ensuing economic, social, religious, and political impacts, will virtually assure that a second and third harmonic of cases and deaths will occur, once restrictions are lifted.
9.    The role of government in requiring vaccination may prove crucial in the future, once an effective, safe, vaccination protocol is found. A case in point is the difference between the mandatory vaccination laws governing childhood diseases (with some religious and other exceptions, recently changed in Washington State law), versus the voluntary flu vaccination recommendations.
10. We do not know whether, or the extent to which, the virus may mutate to other more (or less) dangerous forms. There is some evidence that such mutations are not uncommon.
11.  We know that COVID19 virus community episodes seem to behave as other viruses and communicable diseases do, namely a logarithmic growth phase, a leveling off period, and a decline.  The slopes of the lines give the best evidence of the place a community is in on the curve; the area under the curve represents the total extent of the pandemic (classical differential and integral calculus is in play here).  This is why we are urged to take necessary steps to “flatten the curve” (thereby spreading it out in time to give more time to deal with shortages and take other preventive and treatment steps).
12. The primary means of prevention, in the absence of vaccination, is social distancing for communicable diseases.  Daniel Defoe, in The Journal of the Plague Year, in 1722, described the effectiveness of social distancing by recounting the different results around London in 1665 between those who escaped the city to country places, versus those who were forced (literally) to remain in crowded dwellings with their families, often resulting in the death of the entire family.  
13. The future of the pandemic is largely unknown.  It is complicated by the fact that we have tested less than 2% of the population; those tested are skewed toward health care workers and high susceptibility persons; of those tested about 4 to 15% test positive; of those testing positive, death rates range from 2 to 20%; we don’t know how many asymptomatics are out there; we don’t know whether, when, and the degree to which asymptomatics are shedding virus; nor the effectiveness of preventive measures such as social distancing and masks; treatment modalities; or the expectation of vaccines. It is further complicated by the fact that virtually all data comes in from 50 or more different (e.g., state and local) agencies, each of which has its own set of priorities, capabilities, and epidemic management plans (did someone say something about herding cats?).  We don’t know the recovery rate of symptomatics or asymptomatics. We don’t know whether asymptomatics secure immunity from future attacks.    “Flattening the curve” of deaths will follow “flattening the curve” of positive cases by some number of days, and once the curves are flat, new cases and deaths will continue to follow while the numbers return to near zero, and may very well equal or exceed cases and deaths up to the “plateau” or “apex.”  Furthermore, relaxation of the prevention tools may result in a second and third outbreak, as occurred in the 1918 flu epidemic and others.


COVID19 Oakbrook Blog Created


Greetings,

I've created this blog to share my experiences as a member of the public health community in the Pierce County, WA area.

This is the first in a series of blog messages. I expect this will be a learning experience for me as well as my readers, who are invited to share their views to this (currently) unmoderated blog.

Remember, your comments will appear as you submit them, for all to read.If you want to gain quick and easy access to this blog, simply bookmark or copy the following address:

http://www.covid19 Oakbrook.blogspot.com/

Hopefully, it will serve as a regular update on issues related to the COVID19 pandemic in the world, US, State of Washington, and Pierce County. 

Please offer your comments so we can continue to better serve your needs. All persons are invited to contribute material for this blog (subject only to minimal limitations pertaining to good taste, etc.), and, as long as such self-controls are observed, the blog will remain unmoderated.


Ken Karch, PE